Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col25a1Q99MQ5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Gm44872-201ENSMUST00000207864 420 ntBASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col25a1Q99MQ5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Col25a1Q99MQ5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col25a1Q99MQ5 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col25a1Q99MQ5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col25a1Q99MQ5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col25a1Q99MQ5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col25a1Q99MQ5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col25a1Q99MQ5 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col25a1Q99MQ5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col25a1Q99MQ5 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col25a1Q99MQ5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col25a1Q99MQ5 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col25a1Q99MQ5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms