Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Clp1Q99LI9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Clp1Q99LI9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clp1Q99LI9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clp1Q99LI9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clp1Q99LI9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clp1Q99LI9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clp1Q99LI9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clp1Q99LI9 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.93■□□□□ 0.46
Clp1Q99LI9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clp1Q99LI9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.92■□□□□ 0.46
Clp1Q99LI9 Gm18206-201ENSMUST00000207027 926 ntBASIC17.92■□□□□ 0.46
Clp1Q99LI9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.92■□□□□ 0.46
Clp1Q99LI9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.92■□□□□ 0.46
Clp1Q99LI9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Clp1Q99LI9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Clp1Q99LI9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clp1Q99LI9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Gm2651-201ENSMUST00000203560 838 ntBASIC17.91■□□□□ 0.46
Clp1Q99LI9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clp1Q99LI9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Gm18421-201ENSMUST00000204122 625 ntBASIC17.9■□□□□ 0.46
Clp1Q99LI9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clp1Q99LI9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Clp1Q99LI9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clp1Q99LI9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.89■□□□□ 0.45
Clp1Q99LI9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.89■□□□□ 0.45
Clp1Q99LI9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Clp1Q99LI9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.88■□□□□ 0.45
Clp1Q99LI9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms