Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcc1Q99LI2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcc1Q99LI2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Gm14859-201ENSMUST00000117752 357 ntBASIC16.8■□□□□ 0.28
Clcc1Q99LI2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Mir1668-201ENSMUST00000184114 107 ntBASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Gm10566-201ENSMUST00000086739 996 ntBASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Clcc1Q99LI2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Gm25016-201ENSMUST00000158399 131 ntBASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.79■□□□□ 0.28
Clcc1Q99LI2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Gm7284-201ENSMUST00000131667 944 ntBASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Clcc1Q99LI2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.77■□□□□ 0.28
Clcc1Q99LI2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.77■□□□□ 0.27
Clcc1Q99LI2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcc1Q99LI2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcc1Q99LI2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Clcc1Q99LI2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcc1Q99LI2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcc1Q99LI2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Clcc1Q99LI2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms