Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RtcbQ99LF4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RtcbQ99LF4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Gm15165-201ENSMUST00000118140 502 ntBASIC20.98■□□□□ 0.95
RtcbQ99LF4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.98■□□□□ 0.95
RtcbQ99LF4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RtcbQ99LF4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm8000-201ENSMUST00000188378 592 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44357-201ENSMUST00000195897 142 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm19658-201ENSMUST00000196231 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44367-201ENSMUST00000196836 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44350-201ENSMUST00000197197 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44390-201ENSMUST00000197533 144 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44313-201ENSMUST00000198018 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44486-201ENSMUST00000198508 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44454-201ENSMUST00000198541 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44314-201ENSMUST00000199263 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44394-201ENSMUST00000199558 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44484-201ENSMUST00000199873 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44466-201ENSMUST00000200264 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gm44359-201ENSMUST00000200671 138 ntBASIC20.97■□□□□ 0.95
RtcbQ99LF4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RtcbQ99LF4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RtcbQ99LF4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RtcbQ99LF4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Gm10060-201ENSMUST00000212002 111 ntBASIC20.95■□□□□ 0.94
RtcbQ99LF4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RtcbQ99LF4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Gm11594-201ENSMUST00000122313 162 ntBASIC20.94■□□□□ 0.94
RtcbQ99LF4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.94■□□□□ 0.94
RtcbQ99LF4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Grk6-206ENSMUST00000224995 2971 ntBASIC20.94■□□□□ 0.94
RtcbQ99LF4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.94■□□□□ 0.94
RtcbQ99LF4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RtcbQ99LF4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RtcbQ99LF4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RtcbQ99LF4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms