Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc1bQ920F6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Gm18958-201ENSMUST00000174258 762 ntBASIC19.57■□□□□ 0.72
Smc1bQ920F6 Mir1668-201ENSMUST00000184114 107 ntBASIC19.57■□□□□ 0.72
Smc1bQ920F6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc1bQ920F6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc1bQ920F6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Smc1bQ920F6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc1bQ920F6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.54■□□□□ 0.72
Smc1bQ920F6 Gm7791-201ENSMUST00000219066 539 ntBASIC19.54■□□□□ 0.72
Smc1bQ920F6 Gm7370-201ENSMUST00000219471 767 ntBASIC19.54■□□□□ 0.72
Smc1bQ920F6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc1bQ920F6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Gm7638-201ENSMUST00000121348 967 ntBASIC19.53■□□□□ 0.72
Smc1bQ920F6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Smc1bQ920F6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms