Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Gm18666-201ENSMUST00000190039 958 ntBASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb4Q91XZ6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb4Q91XZ6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Gm37292-201ENSMUST00000192062 758 ntBASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb4Q91XZ6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb4Q91XZ6 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.89■□□□□ 0.3
Pcdhb4Q91XZ6 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb4Q91XZ6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.89■□□□□ 0.3
Pcdhb4Q91XZ6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb4Q91XZ6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Gm29257-201ENSMUST00000186115 639 ntBASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb4Q91XZ6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb4Q91XZ6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms