Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Pcdhgb1Q91XX8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pcdhgb1Q91XX8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Gm27389-201ENSMUST00000183622 195 ntBASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Mir1668-201ENSMUST00000184114 107 ntBASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhgb1Q91XX8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhgb1Q91XX8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgb1Q91XX8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhgb1Q91XX8 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.64■□□□□ 0.42
Pcdhgb1Q91XX8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhgb1Q91XX8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms