Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
TraipQ8VIG6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
TraipQ8VIG6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TraipQ8VIG6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TraipQ8VIG6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TraipQ8VIG6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Gm44450-201ENSMUST00000199528 114 ntBASIC18.08■□□□□ 0.48
TraipQ8VIG6 Gm18669-201ENSMUST00000216049 778 ntBASIC18.08■□□□□ 0.48
TraipQ8VIG6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.08■□□□□ 0.48
TraipQ8VIG6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TraipQ8VIG6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Gm29707-201ENSMUST00000196325 491 ntBASIC18.07■□□□□ 0.48
TraipQ8VIG6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.07■□□□□ 0.48
TraipQ8VIG6 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.07■□□□□ 0.48
TraipQ8VIG6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TraipQ8VIG6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TraipQ8VIG6 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.06■□□□□ 0.48
TraipQ8VIG6 AC154532.1-201ENSMUST00000227860 965 ntBASIC18.06■□□□□ 0.48
TraipQ8VIG6 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 Phf7-203ENSMUST00000226565 1971 ntBASIC18.06■□□□□ 0.48
TraipQ8VIG6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TraipQ8VIG6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.05■□□□□ 0.48
TraipQ8VIG6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TraipQ8VIG6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TraipQ8VIG6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Gm15794-201ENSMUST00000120182 631 ntBASIC18.04■□□□□ 0.48
TraipQ8VIG6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Gm28033-201ENSMUST00000184224 96 ntBASIC18.04■□□□□ 0.48
TraipQ8VIG6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.04■□□□□ 0.48
TraipQ8VIG6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms