Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Gm9103-201ENSMUST00000119371 405 ntBASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Gm27704-201ENSMUST00000185094 107 ntBASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Haglr-201ENSMUST00000100000 2085 ntBASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cdhr1Q8VHP6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cdhr1Q8VHP6 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.59■□□□□ 0.25
Cdhr1Q8VHP6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cdhr1Q8VHP6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cdhr1Q8VHP6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Gm37722-201ENSMUST00000193757 208 ntBASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdhr1Q8VHP6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.56■□□□□ 0.24
Cdhr1Q8VHP6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr1Q8VHP6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr1Q8VHP6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr1Q8VHP6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdhr1Q8VHP6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Cdhr1Q8VHP6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms