Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Gm21814-202ENSMUST00000203277 873 ntBASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Gm3375-201ENSMUST00000203929 796 ntBASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HnrnpuQ8VEK3 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Mir5122-201ENSMUST00000175004 89 ntBASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
HnrnpuQ8VEK3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HnrnpuQ8VEK3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HnrnpuQ8VEK3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
HnrnpuQ8VEK3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HnrnpuQ8VEK3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HnrnpuQ8VEK3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HnrnpuQ8VEK3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Gm7791-201ENSMUST00000219066 539 ntBASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
HnrnpuQ8VEK3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms