Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc71Q8VEG0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc71Q8VEG0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc71Q8VEG0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Gm10052-201ENSMUST00000168019 960 ntBASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Gm7729-201ENSMUST00000050143 801 ntBASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc71Q8VEG0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc71Q8VEG0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Gm11452-201ENSMUST00000122376 690 ntBASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.56■□□□□ 0.4
Ccdc71Q8VEG0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Gm13312-201ENSMUST00000119631 718 ntBASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc71Q8VEG0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms