Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rprd1aQ8VDS4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Gm18958-201ENSMUST00000174258 762 ntBASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rprd1aQ8VDS4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Gm13474-201ENSMUST00000122466 815 ntBASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rprd1aQ8VDS4 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Gm7370-201ENSMUST00000219471 767 ntBASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rprd1aQ8VDS4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rprd1aQ8VDS4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rprd1aQ8VDS4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rprd1aQ8VDS4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rprd1aQ8VDS4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms