Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Mir5122-201ENSMUST00000175004 89 ntBASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sgms1Q8VCQ6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.35■□□□□ 0.53
Sgms1Q8VCQ6 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sgms1Q8VCQ6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sgms1Q8VCQ6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sgms1Q8VCQ6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sgms1Q8VCQ6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Sgms1Q8VCQ6 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sgms1Q8VCQ6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sgms1Q8VCQ6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sgms1Q8VCQ6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Sgms1Q8VCQ6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sgms1Q8VCQ6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Sgms1Q8VCQ6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sgms1Q8VCQ6 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.33■□□□□ 0.52
Sgms1Q8VCQ6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sgms1Q8VCQ6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sgms1Q8VCQ6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sgms1Q8VCQ6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sgms1Q8VCQ6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sgms1Q8VCQ6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Sgms1Q8VCQ6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms