Protein–RNA interactions for Protein: Q8R2U7

Lrrc42, Leucine-rich repeat-containing protein 42, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc42Q8R2U7 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrrc42Q8R2U7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lrrc42Q8R2U7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lrrc42Q8R2U7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.7■□□□□ 0.42
Lrrc42Q8R2U7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Gm10252-201ENSMUST00000209541 832 ntBASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Idnk-204ENSMUST00000226010 1898 ntBASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Lrrc42Q8R2U7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrrc42Q8R2U7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Gm13401-201ENSMUST00000117074 291 ntBASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.67■□□□□ 0.42
Lrrc42Q8R2U7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms