Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Gm9731-201ENSMUST00000209480 747 ntBASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim29Q8R2Q0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim29Q8R2Q0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Odf3b-204ENSMUST00000227834 930 ntBASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim29Q8R2Q0 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Gm7638-201ENSMUST00000121348 967 ntBASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim29Q8R2Q0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim29Q8R2Q0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trim29Q8R2Q0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trim29Q8R2Q0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim29Q8R2Q0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms