Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Zcchc9Q8R1J3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zcchc9Q8R1J3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Zcchc9Q8R1J3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Zcchc9Q8R1J3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Gm9013-201ENSMUST00000132939 882 ntBASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Gm29518-201ENSMUST00000190858 372 ntBASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Gm37025-201ENSMUST00000195159 829 ntBASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Gm8969-201ENSMUST00000199694 526 ntBASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zcchc9Q8R1J3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Gm17971-201ENSMUST00000190239 806 ntBASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zcchc9Q8R1J3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Gm17808-201ENSMUST00000200859 894 ntBASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Il3ra-202ENSMUST00000223589 738 ntBASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Zcchc9Q8R1J3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.92■□□□□ 0.3
Zcchc9Q8R1J3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms