Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Gm10418-201ENSMUST00000100943 576 ntBASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Gm37025-201ENSMUST00000195159 829 ntBASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Alms1Q8K4E0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Alms1Q8K4E0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.58■□□□□ 0.25
Alms1Q8K4E0 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.58■□□□□ 0.25
Alms1Q8K4E0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Alms1Q8K4E0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Alms1Q8K4E0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Alms1Q8K4E0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Alms1Q8K4E0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Alms1Q8K4E0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.57■□□□□ 0.24
Alms1Q8K4E0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Alms1Q8K4E0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Alms1Q8K4E0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms