Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cystm1Q8K353 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC10.7□□□□□ -0.7
Cystm1Q8K353 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Gm3807-201ENSMUST00000193520 1168 ntBASIC10.69□□□□□ -0.7
Cystm1Q8K353 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 AC122335.2-201ENSMUST00000213901 6181 ntBASIC10.69□□□□□ -0.7
Cystm1Q8K353 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cystm1Q8K353 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Gm10461-201ENSMUST00000202073 4786 ntBASIC10.68□□□□□ -0.7
Cystm1Q8K353 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cystm1Q8K353 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Gm12441-201ENSMUST00000121806 588 ntBASIC10.67□□□□□ -0.7
Cystm1Q8K353 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cystm1Q8K353 Gm27032-201ENSMUST00000183124 1116 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms