Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn1Q8K0T0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn1Q8K0T0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn1Q8K0T0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rtn1Q8K0T0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn1Q8K0T0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn1Q8K0T0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Gm7889-201ENSMUST00000185591 958 ntBASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn1Q8K0T0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Gm2274-201ENSMUST00000184539 609 ntBASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn1Q8K0T0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn1Q8K0T0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn1Q8K0T0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rtn1Q8K0T0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn1Q8K0T0 Gm7370-201ENSMUST00000219471 767 ntBASIC19.58■□□□□ 0.72
Rtn1Q8K0T0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Rtn1Q8K0T0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn1Q8K0T0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.57■□□□□ 0.72
Rtn1Q8K0T0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms