Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb7Q8CDY9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb7Q8CDY9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhb7Q8CDY9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhb7Q8CDY9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb7Q8CDY9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb7Q8CDY9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb7Q8CDY9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb7Q8CDY9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb7Q8CDY9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb7Q8CDY9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb7Q8CDY9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Gm10517-202ENSMUST00000192970 758 ntBASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb7Q8CDY9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb7Q8CDY9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhb7Q8CDY9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms