Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc60Q8C4J0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ccdc60Q8C4J0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ccdc60Q8C4J0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Mir7071-201ENSMUST00000184847 69 ntBASIC21.7■■□□□ 1.06
Ccdc60Q8C4J0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Ccdc60Q8C4J0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Gm9987-201ENSMUST00000069768 567 ntBASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.68■■□□□ 1.06
Ccdc60Q8C4J0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc60Q8C4J0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ccdc60Q8C4J0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 Gm18959-201ENSMUST00000208954 655 ntBASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc60Q8C4J0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.64■■□□□ 1.06
Ccdc60Q8C4J0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc60Q8C4J0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Ccdc60Q8C4J0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc60Q8C4J0 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Ccdc60Q8C4J0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc60Q8C4J0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ccdc60Q8C4J0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms