Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rft1Q8C3B8 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rft1Q8C3B8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Gm13168-201ENSMUST00000121771 632 ntBASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.18■□□□□ 0.02
Rft1Q8C3B8 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Gm11249-201ENSMUST00000117071 859 ntBASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Gm22240-201ENSMUST00000175225 82 ntBASIC15.17■□□□□ 0.02
Rft1Q8C3B8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rft1Q8C3B8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rft1Q8C3B8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rft1Q8C3B8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rft1Q8C3B8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rft1Q8C3B8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms