Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Fam43aQ8BUP8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Gm10653-202ENSMUST00000139570 835 ntBASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Fam43aQ8BUP8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fam43aQ8BUP8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Gm27011-201ENSMUST00000182352 972 ntBASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Tgds-204ENSMUST00000228543 1594 ntBASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Fam43aQ8BUP8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Dio3-201ENSMUST00000097228 1449 ntBASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Gm37856-201ENSMUST00000191634 999 ntBASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Mtag2-201ENSMUST00000058665 714 ntBASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Fam43aQ8BUP8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fam43aQ8BUP8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms