Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Smco3Q8BQM7 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Smco3Q8BQM7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smco3Q8BQM7 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.05□□□□□ -0.16
Smco3Q8BQM7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Gm45417-201ENSMUST00000209533 758 ntBASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smco3Q8BQM7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Smco3Q8BQM7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms