Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Gm43799-201ENSMUST00000201845 579 ntBASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Timm23-208ENSMUST00000226683 750 ntBASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Depdc1bQ8BH88 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Depdc1bQ8BH88 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Depdc1bQ8BH88 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Depdc1bQ8BH88 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Depdc1bQ8BH88 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Depdc1bQ8BH88 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Depdc1bQ8BH88 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Gm30025-201ENSMUST00000218555 728 ntBASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Depdc1bQ8BH88 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Depdc1bQ8BH88 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Gm4974-201ENSMUST00000209974 875 ntBASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Depdc1bQ8BH88 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms