Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Gm6576-201ENSMUST00000169678 883 ntBASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Upk3bQ80YF6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk3bQ80YF6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Gm10849-201ENSMUST00000100397 618 ntBASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk3bQ80YF6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Gm13148-201ENSMUST00000118892 745 ntBASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Gm15375-201ENSMUST00000119510 849 ntBASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Mir5133-201ENSMUST00000174955 77 ntBASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk3bQ80YF6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms