Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm3Q80WV7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm3Q80WV7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Srrm3Q80WV7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.72■□□□□ 0.43
Srrm3Q80WV7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Gm10819-201ENSMUST00000099988 561 ntBASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Srrm3Q80WV7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Srrm3Q80WV7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Gm5643-201ENSMUST00000117081 966 ntBASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Srrm3Q80WV7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Gm9987-201ENSMUST00000069768 567 ntBASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Srrm3Q80WV7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.68■□□□□ 0.42
Srrm3Q80WV7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Srrm3Q80WV7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms