Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Gm4535-201ENSMUST00000182274 558 ntBASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Mir8112-201ENSMUST00000184382 131 ntBASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Gm10355-201ENSMUST00000097146 517 ntBASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Vps13bQ80TY5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Vps13bQ80TY5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Gm13616-201ENSMUST00000120600 222 ntBASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Vps13bQ80TY5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Gm5784-201ENSMUST00000179344 2478 ntBASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Mir6956-201ENSMUST00000183598 62 ntBASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Vps13bQ80TY5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Gm43272-201ENSMUST00000200599 1584 ntBASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Vps13bQ80TY5 Gm43231-201ENSMUST00000202960 2258 ntBASIC10.12□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms