Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Gm10653-202ENSMUST00000139570 835 ntBASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Gm17661-201ENSMUST00000170317 270 ntBASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssx9Q6XAS3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssx9Q6XAS3 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Gm20760-201ENSMUST00000179197 648 ntBASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssx9Q6XAS3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssx9Q6XAS3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Ssx9Q6XAS3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ssx9Q6XAS3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ssx9Q6XAS3 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssx9Q6XAS3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Gm12085-201ENSMUST00000119263 940 ntBASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ssx9Q6XAS3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms