Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sp140Q6NSQ5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sp140Q6NSQ5 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Gm7638-201ENSMUST00000121348 967 ntBASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sp140Q6NSQ5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sp140Q6NSQ5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Gm9731-201ENSMUST00000209480 747 ntBASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sp140Q6NSQ5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.21■□□□□ 0.34
Sp140Q6NSQ5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sp140Q6NSQ5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sp140Q6NSQ5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Sp140Q6NSQ5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sp140Q6NSQ5 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.21■□□□□ 0.34
Sp140Q6NSQ5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Gm715-201ENSMUST00000117865 831 ntBASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.2■□□□□ 0.34
Sp140Q6NSQ5 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sp140Q6NSQ5 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sp140Q6NSQ5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sp140Q6NSQ5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms