Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Gm18025-201ENSMUST00000221733 862 ntBASIC18.82■□□□□ 0.6
Krt39Q6IFX4 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Krt39Q6IFX4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Gm27011-201ENSMUST00000182352 972 ntBASIC18.81■□□□□ 0.6
Krt39Q6IFX4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Krt39Q6IFX4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Gm10653-202ENSMUST00000139570 835 ntBASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Gm27275-201ENSMUST00000184318 272 ntBASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.8■□□□□ 0.6
Krt39Q6IFX4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Gm13158-201ENSMUST00000122007 736 ntBASIC18.79■□□□□ 0.6
Krt39Q6IFX4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Krt39Q6IFX4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Gm20760-201ENSMUST00000179197 648 ntBASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Krt39Q6IFX4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Krt39Q6IFX4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms