Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhga7Q6DD96 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga7Q6DD96 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga7Q6DD96 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga7Q6DD96 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
Pcdhga7Q6DD96 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga7Q6DD96 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga7Q6DD96 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Pcdhga7Q6DD96 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Gm4974-201ENSMUST00000209974 875 ntBASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga7Q6DD96 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Gm12527-201ENSMUST00000117967 564 ntBASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Gm37856-201ENSMUST00000191634 999 ntBASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhga7Q6DD96 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Gm12382-201ENSMUST00000122005 922 ntBASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Gm18666-201ENSMUST00000190039 958 ntBASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhga7Q6DD96 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Gm10517-202ENSMUST00000192970 758 ntBASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdhga7Q6DD96 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga7Q6DD96 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga7Q6DD96 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga7Q6DD96 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga7Q6DD96 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga7Q6DD96 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga7Q6DD96 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhga7Q6DD96 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms