Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc3Q64519 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc3Q64519 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sdc3Q64519 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Sdc3Q64519 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sdc3Q64519 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Sdc3Q64519 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.33■□□□□ 0.2
Sdc3Q64519 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sdc3Q64519 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.32■□□□□ 0.2
Sdc3Q64519 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Sdc3Q64519 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Sdc3Q64519 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Sdc3Q64519 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.32■□□□□ 0.2
Sdc3Q64519 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sdc3Q64519 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Sdc3Q64519 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Sdc3Q64519 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sdc3Q64519 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.31■□□□□ 0.2
Sdc3Q64519 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sdc3Q64519 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sdc3Q64519 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sdc3Q64519 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sdc3Q64519 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Mir8112-201ENSMUST00000184382 131 ntBASIC16.3■□□□□ 0.2
Sdc3Q64519 Gm45058-201ENSMUST00000205810 766 ntBASIC16.3■□□□□ 0.2
Sdc3Q64519 Gm9731-201ENSMUST00000209480 747 ntBASIC16.3■□□□□ 0.2
Sdc3Q64519 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sdc3Q64519 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sdc3Q64519 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sdc3Q64519 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sdc3Q64519 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sdc3Q64519 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.29■□□□□ 0.2
Sdc3Q64519 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.29■□□□□ 0.2
Sdc3Q64519 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sdc3Q64519 Gm37025-201ENSMUST00000195159 829 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms