Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.24□□□□□ -0.13
SspnQ62147 Gm42545-201ENSMUST00000202755 922 ntBASIC14.24□□□□□ -0.13
SspnQ62147 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SspnQ62147 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SspnQ62147 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.23□□□□□ -0.13
SspnQ62147 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SspnQ62147 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.23□□□□□ -0.13
SspnQ62147 Trmt13-210ENSMUST00000198454 880 ntBASIC14.23□□□□□ -0.13
SspnQ62147 Gm18025-201ENSMUST00000221733 862 ntBASIC14.23□□□□□ -0.13
SspnQ62147 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SspnQ62147 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SspnQ62147 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SspnQ62147 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SspnQ62147 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SspnQ62147 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.23□□□□□ -0.13
SspnQ62147 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
SspnQ62147 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.22□□□□□ -0.13
SspnQ62147 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SspnQ62147 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Gm12382-201ENSMUST00000122005 922 ntBASIC14.22□□□□□ -0.13
SspnQ62147 Gm18666-201ENSMUST00000190039 958 ntBASIC14.22□□□□□ -0.13
SspnQ62147 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.22□□□□□ -0.13
SspnQ62147 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.22□□□□□ -0.13
SspnQ62147 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SspnQ62147 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SspnQ62147 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SspnQ62147 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SspnQ62147 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SspnQ62147 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.21□□□□□ -0.13
SspnQ62147 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SspnQ62147 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SspnQ62147 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SspnQ62147 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SspnQ62147 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.21□□□□□ -0.13
SspnQ62147 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.21□□□□□ -0.13
SspnQ62147 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.21□□□□□ -0.13
SspnQ62147 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SspnQ62147 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SspnQ62147 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SspnQ62147 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
SspnQ62147 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.21□□□□□ -0.13
SspnQ62147 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
SspnQ62147 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SspnQ62147 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SspnQ62147 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SspnQ62147 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SspnQ62147 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
SspnQ62147 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SspnQ62147 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SspnQ62147 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SspnQ62147 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.2□□□□□ -0.14
SspnQ62147 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.2□□□□□ -0.14
SspnQ62147 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SspnQ62147 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms