Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Ctr9Q62018 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ctr9Q62018 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctr9Q62018 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ctr9Q62018 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ctr9Q62018 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctr9Q62018 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Ctr9Q62018 AA414768-201ENSMUST00000121924 1257 ntBASIC20.03■□□□□ 0.8
Ctr9Q62018 Gm6345-202ENSMUST00000180900 204 ntBASIC20.03■□□□□ 0.8
Ctr9Q62018 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.03■□□□□ 0.8
Ctr9Q62018 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctr9Q62018 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctr9Q62018 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctr9Q62018 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Ctr9Q62018 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ctr9Q62018 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ctr9Q62018 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ctr9Q62018 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ctr9Q62018 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ctr9Q62018 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ctr9Q62018 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.02■□□□□ 0.8
Ctr9Q62018 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ctr9Q62018 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ctr9Q62018 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ctr9Q62018 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ctr9Q62018 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ctr9Q62018 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ctr9Q62018 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.01■□□□□ 0.79
Ctr9Q62018 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Ctr9Q62018 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Gm26039-201ENSMUST00000158152 144 ntBASIC20.01■□□□□ 0.79
Ctr9Q62018 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ctr9Q62018 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ctr9Q62018 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ctr9Q62018 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ctr9Q62018 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Ctr9Q62018 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Ctr9Q62018 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ctr9Q62018 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ctr9Q62018 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Ctr9Q62018 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ctr9Q62018 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.99■□□□□ 0.79
Ctr9Q62018 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.99■□□□□ 0.79
Ctr9Q62018 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.99■□□□□ 0.79
Ctr9Q62018 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.99■□□□□ 0.79
Ctr9Q62018 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Ctr9Q62018 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
Ctr9Q62018 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ctr9Q62018 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ctr9Q62018 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ctr9Q62018 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms