Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Gm2756-201ENSMUST00000195851 400 ntBASIC20.66■□□□□ 0.9
Ubr3Q5U430 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr3Q5U430 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ubr3Q5U430 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.65■□□□□ 0.9
Ubr3Q5U430 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr3Q5U430 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr3Q5U430 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr3Q5U430 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ubr3Q5U430 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr3Q5U430 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr3Q5U430 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr3Q5U430 Gm14822-201ENSMUST00000122247 291 ntBASIC20.64■□□□□ 0.9
Ubr3Q5U430 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ubr3Q5U430 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ubr3Q5U430 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ubr3Q5U430 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ubr3Q5U430 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ubr3Q5U430 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr3Q5U430 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr3Q5U430 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Ubr3Q5U430 Gm7063-201ENSMUST00000186840 981 ntBASIC20.64■□□□□ 0.89
Ubr3Q5U430 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.64■□□□□ 0.89
Ubr3Q5U430 CT943659.1-201ENSMUST00000215459 326 ntBASIC20.64■□□□□ 0.89
Ubr3Q5U430 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr3Q5U430 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr3Q5U430 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr3Q5U430 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr3Q5U430 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr3Q5U430 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr3Q5U430 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.63■□□□□ 0.89
Ubr3Q5U430 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Gm9727-201ENSMUST00000161387 555 ntBASIC20.63■□□□□ 0.89
Ubr3Q5U430 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC20.63■□□□□ 0.89
Ubr3Q5U430 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.63■□□□□ 0.89
Ubr3Q5U430 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.63■□□□□ 0.89
Ubr3Q5U430 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr3Q5U430 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.63■□□□□ 0.89
Ubr3Q5U430 Gm12497-201ENSMUST00000138778 237 ntBASIC20.62■□□□□ 0.89
Ubr3Q5U430 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.62■□□□□ 0.89
Ubr3Q5U430 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.62■□□□□ 0.89
Ubr3Q5U430 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr3Q5U430 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.61■□□□□ 0.89
Ubr3Q5U430 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC20.61■□□□□ 0.89
Ubr3Q5U430 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Gm27628-201ENSMUST00000184911 107 ntBASIC20.61■□□□□ 0.89
Ubr3Q5U430 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Gm15590-201ENSMUST00000078419 552 ntBASIC20.61■□□□□ 0.89
Ubr3Q5U430 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr3Q5U430 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.6■□□□□ 0.89
Ubr3Q5U430 AV026068-213ENSMUST00000223675 1171 ntBASIC20.6■□□□□ 0.89
Ubr3Q5U430 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr3Q5U430 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms