Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf43Q5NCP0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Gm28659-201ENSMUST00000188013 759 ntBASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Idnk-204ENSMUST00000226010 1898 ntBASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf43Q5NCP0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Gm27459-201ENSMUST00000184860 107 ntBASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Gm43514-201ENSMUST00000198852 424 ntBASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf43Q5NCP0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf43Q5NCP0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Fst-202ENSMUST00000223640 2612 ntBASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf43Q5NCP0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Rnf43Q5NCP0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Gm6443-201ENSMUST00000203599 874 ntBASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf43Q5NCP0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms