Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Gm13216-201ENSMUST00000117145 591 ntBASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Cks1brtQ3UNC9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cks1brtQ3UNC9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Idnk-204ENSMUST00000226010 1898 ntBASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cks1brtQ3UNC9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cks1brtQ3UNC9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms