Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Gm11336-201ENSMUST00000118168 334 ntBASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pkd1l3Q2EG98 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Phf7-203ENSMUST00000226565 1971 ntBASIC15.22■□□□□ 0.03
Pkd1l3Q2EG98 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pkd1l3Q2EG98 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pkd1l3Q2EG98 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pkd1l3Q2EG98 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pkd1l3Q2EG98 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pkd1l3Q2EG98 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pkd1l3Q2EG98 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Pkd1l3Q2EG98 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pkd1l3Q2EG98 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pkd1l3Q2EG98 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pkd1l3Q2EG98 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms