Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Col10a1Q05306 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Col10a1Q05306 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Col10a1Q05306 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col10a1Q05306 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Col10a1Q05306 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.67■□□□□ 0.1
Col10a1Q05306 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Gm13559-201ENSMUST00000120476 863 ntBASIC15.67■□□□□ 0.1
Col10a1Q05306 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Col10a1Q05306 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.67■□□□□ 0.1
Col10a1Q05306 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col10a1Q05306 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.67■□□□□ 0.1
Col10a1Q05306 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col10a1Q05306 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col10a1Q05306 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Col10a1Q05306 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.66■□□□□ 0.1
Col10a1Q05306 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.66■□□□□ 0.1
Col10a1Q05306 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Col10a1Q05306 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col10a1Q05306 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.65■□□□□ 0.1
Col10a1Q05306 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Col10a1Q05306 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col10a1Q05306 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col10a1Q05306 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.65■□□□□ 0.1
Col10a1Q05306 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.65■□□□□ 0.1
Col10a1Q05306 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms