Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra1P97785 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra1P97785 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.07□□□□□ -0.16
Gfra1P97785 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.07□□□□□ -0.16
Gfra1P97785 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gfra1P97785 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gfra1P97785 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.06□□□□□ -0.16
Gfra1P97785 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gfra1P97785 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Gm6659-201ENSMUST00000174752 547 ntBASIC14.06□□□□□ -0.16
Gfra1P97785 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.06□□□□□ -0.16
Gfra1P97785 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.06□□□□□ -0.16
Gfra1P97785 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gfra1P97785 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Gfra1P97785 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Gfra1P97785 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.05□□□□□ -0.16
Gfra1P97785 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.05□□□□□ -0.16
Gfra1P97785 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Gfra1P97785 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gfra1P97785 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.04□□□□□ -0.16
Gfra1P97785 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.04□□□□□ -0.16
Gfra1P97785 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Gm18958-201ENSMUST00000174258 762 ntBASIC14.04□□□□□ -0.16
Gfra1P97785 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.04□□□□□ -0.16
Gfra1P97785 Gm27389-201ENSMUST00000183622 195 ntBASIC14.04□□□□□ -0.16
Gfra1P97785 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gfra1P97785 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Gfra1P97785 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Gfra1P97785 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Gfra1P97785 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gfra1P97785 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.03□□□□□ -0.16
Gfra1P97785 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gfra1P97785 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Gfra1P97785 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.03□□□□□ -0.16
Gfra1P97785 Mir1668-201ENSMUST00000184114 107 ntBASIC14.03□□□□□ -0.16
Gfra1P97785 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Gfra1P97785 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.03□□□□□ -0.16
Gfra1P97785 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.03□□□□□ -0.16
Gfra1P97785 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Gfra1P97785 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Gfra1P97785 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gfra1P97785 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms