Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ThraP63058 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ThraP63058 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ThraP63058 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
ThraP63058 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ThraP63058 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ThraP63058 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
ThraP63058 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.2■□□□□ 0.34
ThraP63058 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ThraP63058 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ThraP63058 Gm7889-201ENSMUST00000185591 958 ntBASIC17.2■□□□□ 0.34
ThraP63058 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.2■□□□□ 0.34
ThraP63058 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ThraP63058 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ThraP63058 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ThraP63058 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ThraP63058 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ThraP63058 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.2■□□□□ 0.34
ThraP63058 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ThraP63058 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ThraP63058 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ThraP63058 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ThraP63058 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ThraP63058 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ThraP63058 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ThraP63058 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
ThraP63058 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.19■□□□□ 0.34
ThraP63058 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.19■□□□□ 0.34
ThraP63058 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.19■□□□□ 0.34
ThraP63058 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ThraP63058 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.19■□□□□ 0.34
ThraP63058 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ThraP63058 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ThraP63058 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
ThraP63058 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.18■□□□□ 0.34
ThraP63058 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.18■□□□□ 0.34
ThraP63058 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ThraP63058 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.18■□□□□ 0.34
ThraP63058 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ThraP63058 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ThraP63058 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ThraP63058 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.17■□□□□ 0.34
ThraP63058 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ThraP63058 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.17■□□□□ 0.34
ThraP63058 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.17■□□□□ 0.34
ThraP63058 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ThraP63058 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ThraP63058 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ThraP63058 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.16■□□□□ 0.34
ThraP63058 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.16■□□□□ 0.34
ThraP63058 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.16■□□□□ 0.34
ThraP63058 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ThraP63058 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ThraP63058 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms