Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.16□□□□□ -0.46
Cks1bP61025 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cks1bP61025 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cks1bP61025 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cks1bP61025 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cks1bP61025 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cks1bP61025 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.15□□□□□ -0.46
Cks1bP61025 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Cks1bP61025 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Cks1bP61025 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.15□□□□□ -0.46
Cks1bP61025 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.15□□□□□ -0.46
Cks1bP61025 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cks1bP61025 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cks1bP61025 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.47
Cks1bP61025 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cks1bP61025 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cks1bP61025 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cks1bP61025 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cks1bP61025 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.14□□□□□ -0.47
Cks1bP61025 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cks1bP61025 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cks1bP61025 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.14□□□□□ -0.47
Cks1bP61025 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cks1bP61025 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cks1bP61025 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cks1bP61025 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.14□□□□□ -0.47
Cks1bP61025 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cks1bP61025 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.13□□□□□ -0.47
Cks1bP61025 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cks1bP61025 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cks1bP61025 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cks1bP61025 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cks1bP61025 Appbp2os-202ENSMUST00000206972 447 ntBASIC12.13□□□□□ -0.47
Cks1bP61025 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms