Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm42642-201ENSMUST00000200683 355 ntBASIC19.01■□□□□ 0.63
Tpm1P58771 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tpm1P58771 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tpm1P58771 Zfp783-201ENSMUST00000095946 670 ntBASIC19.01■□□□□ 0.63
Tpm1P58771 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Tpm1P58771 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tpm1P58771 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Gm26596-201ENSMUST00000180464 2655 ntBASIC19■□□□□ 0.63
Tpm1P58771 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tpm1P58771 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Tpm1P58771 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Flg-201ENSMUST00000050758 1488 ntBASIC19■□□□□ 0.63
Tpm1P58771 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tpm1P58771 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Tpm1P58771 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tpm1P58771 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Tpm1P58771 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Tpm1P58771 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.99■□□□□ 0.63
Tpm1P58771 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Tpm1P58771 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.99■□□□□ 0.63
Tpm1P58771 Gm7291-201ENSMUST00000199147 382 ntBASIC18.99■□□□□ 0.63
Tpm1P58771 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tpm1P58771 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Tpm1P58771 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.98■□□□□ 0.63
Tpm1P58771 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tpm1P58771 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.98■□□□□ 0.63
Tpm1P58771 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.98■□□□□ 0.63
Tpm1P58771 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.98■□□□□ 0.63
Tpm1P58771 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tpm1P58771 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.98■□□□□ 0.63
Tpm1P58771 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.98■□□□□ 0.63
Tpm1P58771 AV356131-201ENSMUST00000206201 750 ntBASIC18.98■□□□□ 0.63
Tpm1P58771 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tpm1P58771 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tpm1P58771 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tpm1P58771 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tpm1P58771 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tpm1P58771 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Tpm1P58771 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tpm1P58771 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tpm1P58771 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Tpm1P58771 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tpm1P58771 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.97■□□□□ 0.63
Tpm1P58771 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Tpm1P58771 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tpm1P58771 Gm7290-201ENSMUST00000104990 617 ntBASIC18.97■□□□□ 0.63
Tpm1P58771 Gm12918-201ENSMUST00000120234 636 ntBASIC18.97■□□□□ 0.63
Tpm1P58771 Gm15710-201ENSMUST00000121821 636 ntBASIC18.97■□□□□ 0.63
Tpm1P58771 Gm5075-201ENSMUST00000196916 622 ntBASIC18.97■□□□□ 0.63
Tpm1P58771 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.97■□□□□ 0.63
Tpm1P58771 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.97■□□□□ 0.63
Tpm1P58771 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.97■□□□□ 0.63
Tpm1P58771 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tpm1P58771 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tpm1P58771 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tpm1P58771 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tpm1P58771 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Tpm1P58771 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Tpm1P58771 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Tpm1P58771 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Tpm1P58771 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tpm1P58771 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.96■□□□□ 0.63
Tpm1P58771 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms