Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC19.27■□□□□ 0.68
Usp25P57080 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Usp25P57080 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Usp25P57080 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp25P57080 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp25P57080 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Usp25P57080 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp25P57080 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp25P57080 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Usp25P57080 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.26■□□□□ 0.67
Usp25P57080 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.26■□□□□ 0.67
Usp25P57080 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Usp25P57080 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp25P57080 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.26■□□□□ 0.67
Usp25P57080 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Usp25P57080 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Usp25P57080 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Usp25P57080 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Usp25P57080 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.25■□□□□ 0.67
Usp25P57080 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp25P57080 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp25P57080 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp25P57080 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.25■□□□□ 0.67
Usp25P57080 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.25■□□□□ 0.67
Usp25P57080 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Usp25P57080 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Usp25P57080 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp25P57080 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp25P57080 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Usp25P57080 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp25P57080 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Usp25P57080 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp25P57080 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.24■□□□□ 0.67
Usp25P57080 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp25P57080 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Gm11927-201ENSMUST00000118472 759 ntBASIC19.23■□□□□ 0.67
Usp25P57080 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.23■□□□□ 0.67
Usp25P57080 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.23■□□□□ 0.67
Usp25P57080 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Mtag2-201ENSMUST00000058665 714 ntBASIC19.23■□□□□ 0.67
Usp25P57080 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp25P57080 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp25P57080 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms