Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sssca1P56873 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sssca1P56873 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sssca1P56873 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.78□□□□□ -0.2
Sssca1P56873 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sssca1P56873 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.78□□□□□ -0.2
Sssca1P56873 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sssca1P56873 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.77□□□□□ -0.2
Sssca1P56873 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Sssca1P56873 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.77□□□□□ -0.21
Sssca1P56873 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sssca1P56873 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC13.77□□□□□ -0.21
Sssca1P56873 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Sssca1P56873 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Sssca1P56873 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.76□□□□□ -0.21
Sssca1P56873 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Sssca1P56873 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Sssca1P56873 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Sssca1P56873 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Sssca1P56873 Gm11643-201ENSMUST00000119578 864 ntBASIC13.76□□□□□ -0.21
Sssca1P56873 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.76□□□□□ -0.21
Sssca1P56873 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Sssca1P56873 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Sssca1P56873 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sssca1P56873 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.76□□□□□ -0.21
Sssca1P56873 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Sssca1P56873 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sssca1P56873 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.75□□□□□ -0.21
Sssca1P56873 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sssca1P56873 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.75□□□□□ -0.21
Sssca1P56873 Rab3c-203ENSMUST00000224180 967 ntBASIC13.75□□□□□ -0.21
Sssca1P56873 Mtag2-201ENSMUST00000058665 714 ntBASIC13.75□□□□□ -0.21
Sssca1P56873 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.75□□□□□ -0.21
Sssca1P56873 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sssca1P56873 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.75□□□□□ -0.21
Sssca1P56873 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sssca1P56873 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sssca1P56873 Mir6349-201ENSMUST00000184059 97 ntBASIC13.74□□□□□ -0.21
Sssca1P56873 Gm26524-201ENSMUST00000192339 390 ntBASIC13.74□□□□□ -0.21
Sssca1P56873 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sssca1P56873 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sssca1P56873 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms