Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NcanP55066 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NcanP55066 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Gm25990-201ENSMUST00000102440 86 ntBASIC17.96■□□□□ 0.47
NcanP55066 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
NcanP55066 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NcanP55066 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.96■□□□□ 0.47
NcanP55066 Gm18421-201ENSMUST00000204122 625 ntBASIC17.96■□□□□ 0.47
NcanP55066 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.96■□□□□ 0.47
NcanP55066 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
NcanP55066 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NcanP55066 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.95■□□□□ 0.46
NcanP55066 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NcanP55066 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC17.95■□□□□ 0.46
NcanP55066 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.95■□□□□ 0.46
NcanP55066 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
NcanP55066 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NcanP55066 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NcanP55066 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NcanP55066 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
NcanP55066 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NcanP55066 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NcanP55066 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.94■□□□□ 0.46
NcanP55066 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.94■□□□□ 0.46
NcanP55066 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.94■□□□□ 0.46
NcanP55066 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NcanP55066 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NcanP55066 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NcanP55066 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NcanP55066 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NcanP55066 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.93■□□□□ 0.46
NcanP55066 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NcanP55066 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.93■□□□□ 0.46
NcanP55066 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Gm25911-201ENSMUST00000157621 56 ntBASIC17.93■□□□□ 0.46
NcanP55066 Gm7230-201ENSMUST00000173026 815 ntBASIC17.93■□□□□ 0.46
NcanP55066 Gm29707-201ENSMUST00000196325 491 ntBASIC17.93■□□□□ 0.46
NcanP55066 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.93■□□□□ 0.46
NcanP55066 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.93■□□□□ 0.46
NcanP55066 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NcanP55066 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NcanP55066 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NcanP55066 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NcanP55066 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.92■□□□□ 0.46
NcanP55066 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.92■□□□□ 0.46
NcanP55066 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NcanP55066 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NcanP55066 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NcanP55066 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NcanP55066 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NcanP55066 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NcanP55066 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
NcanP55066 Gm14140-201ENSMUST00000119999 995 ntBASIC17.91■□□□□ 0.46
NcanP55066 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.91■□□□□ 0.46
NcanP55066 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.91■□□□□ 0.46
NcanP55066 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NcanP55066 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NcanP55066 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NcanP55066 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms