Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Gm6420-201ENSMUST00000193885 723 ntBASIC14.14□□□□□ -0.15
Nkx2-1P50220 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx2-1P50220 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx2-1P50220 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.13□□□□□ -0.15
Nkx2-1P50220 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx2-1P50220 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Nespas-201ENSMUST00000143738 1083 ntBASIC14.13□□□□□ -0.15
Nkx2-1P50220 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nkx2-1P50220 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx2-1P50220 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Nkx2-1P50220 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkx2-1P50220 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx2-1P50220 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Gm10849-201ENSMUST00000100397 618 ntBASIC14.1□□□□□ -0.15
Nkx2-1P50220 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.1□□□□□ -0.15
Nkx2-1P50220 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx2-1P50220 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms