Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Sox6P40645 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox6P40645 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.99■□□□□ 0.15
Sox6P40645 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.99■□□□□ 0.15
Sox6P40645 Gm18666-201ENSMUST00000190039 958 ntBASIC15.99■□□□□ 0.15
Sox6P40645 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.99■□□□□ 0.15
Sox6P40645 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Sox6P40645 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox6P40645 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Sox6P40645 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Sox6P40645 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.98■□□□□ 0.15
Sox6P40645 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sox6P40645 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.98■□□□□ 0.15
Sox6P40645 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Sox6P40645 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Sox6P40645 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.97■□□□□ 0.15
Sox6P40645 Gm10138-203ENSMUST00000206952 366 ntBASIC15.97■□□□□ 0.15
Sox6P40645 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.97■□□□□ 0.15
Sox6P40645 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.97■□□□□ 0.15
Sox6P40645 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.97■□□□□ 0.15
Sox6P40645 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Sox6P40645 Mtag2-201ENSMUST00000058665 714 ntBASIC15.97■□□□□ 0.15
Sox6P40645 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.97■□□□□ 0.15
Sox6P40645 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Sox6P40645 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sox6P40645 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sox6P40645 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
Sox6P40645 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox6P40645 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Sox6P40645 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sox6P40645 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox6P40645 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.96■□□□□ 0.15
Sox6P40645 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sox6P40645 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox6P40645 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.96■□□□□ 0.15
Sox6P40645 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.96■□□□□ 0.15
Sox6P40645 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox6P40645 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sox6P40645 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox6P40645 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Sox6P40645 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sox6P40645 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sox6P40645 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Sox6P40645 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.95■□□□□ 0.14
Sox6P40645 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sox6P40645 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
Sox6P40645 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sox6P40645 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms