Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rb1P13405 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rb1P13405 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rb1P13405 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rb1P13405 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rb1P13405 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.36■□□□□ 0.37
Rb1P13405 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Gm25016-201ENSMUST00000158399 131 ntBASIC17.36■□□□□ 0.37
Rb1P13405 Gm27741-201ENSMUST00000185060 237 ntBASIC17.36■□□□□ 0.37
Rb1P13405 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.36■□□□□ 0.37
Rb1P13405 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.36■□□□□ 0.37
Rb1P13405 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.36■□□□□ 0.37
Rb1P13405 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rb1P13405 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rb1P13405 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.35■□□□□ 0.37
Rb1P13405 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rb1P13405 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.35■□□□□ 0.37
Rb1P13405 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rb1P13405 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Rb1P13405 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rb1P13405 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.35■□□□□ 0.37
Rb1P13405 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.35■□□□□ 0.37
Rb1P13405 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.35■□□□□ 0.37
Rb1P13405 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rb1P13405 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rb1P13405 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rb1P13405 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Rb1P13405 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Gm22697-201ENSMUST00000175194 63 ntBASIC17.34■□□□□ 0.37
Rb1P13405 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rb1P13405 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Rb1P13405 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Rb1P13405 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Rb1P13405 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rb1P13405 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Rb1P13405 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rb1P13405 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rb1P13405 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rb1P13405 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rb1P13405 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rb1P13405 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rb1P13405 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rb1P13405 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rb1P13405 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rb1P13405 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms